Diamidinophenylindole
Neurobiology graduate and lover of all things anatomy.

Content included: personal and PhD business, olympic weightlifting and a particular focus in science.

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wetheurban:

DESIGN: The Coffee-Making Alarm Clock

We need this because reasons. This one’s for the coffee drinkers amongst you - British designer Joshua Renouf has come up with a coffee making alarm clock which can wake you up with a fresh cup of joe.

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OH.MY.LORD.

Cooking with ouzo.

# greekyolo

neurosciencestuff:

Study Suggests Disruptive Effects of Anesthesia on Brain Cell Connections Are Temporary

A study of juvenile rat brain cells suggests that the effects of a commonly used anesthetic drug on the connections between brain cells are temporary.

The study, published in this week’s issue of the journal PLOS ONE, was conducted by biologists at the University of California, San Diego and Weill Cornell Medical College in New York in response to concerns, arising from multiple studies on humans over the past decade, that exposing children to general anesthetics may increase their susceptibility to long-term cognitive and behavioral deficits, such as learning disabilities.

An estimated six million children, including 1.5 million infants, undergo surgery in the United States requiring general anesthesia each year and a least two large-scale clinical studies are now underway to determine the potential risks to children and adults.

“Since these procedures are unavoidable in most cases, it’s important to understand the mechanisms associated with the potentially toxic effects of anesthetics on the developing brain, and on the adult brain as well,” said Shelley Halpain, a professor of biology at UC San Diego and the Sanford Consortium for Regenerative Medicine, who co-headed the investigation. “Because the clinical studies haven’t been completed, preclinical studies, such as ours, are needed to define the effects of various anesthetics on brain structure and function.”

“There is concern now about cognitive dysfunction from surgery and anesthesia—how much these effects are either permanent or slowly reversible is very controversial,” said Hugh Hemmings, Jr., chair of anesthesiology at Weill Cornell and the study’s other senior author. “It has been suggested recently that some of the effects of anesthesia may be more lasting than previously thought. It is not clear whether the residual effects after an operation are due to the surgery itself, or the hospitalization and attendant trauma, medications and stress—or a combination of these issues.”

However, he added, “There is evidence that some of the delayed or persistent cognitive effects after surgery are not primarily due to anesthesia itself, but more importantly to brain inflammation resulting from the surgery. But this is not yet clear.”

The team of biologists examined one of the most commonly used general anesthetics, a derivative of ether called “isoflurane” used to maintain anesthesia during surgery.

“Previous studies in cultured neurons and in the intact brains of rodents provided evidence suggesting that exposure to anesthetics might render neurons more susceptible to cell death through a process called ‘apoptosis’,” said Halpain. “While overt cell death could certainly be one way to explain any long-lasting neurocognitive consequences of general anesthesia, we hypothesized that there could be other cellular mechanisms that disrupt neural circuits without inducing cell death per se.”

One such mechanism, she added, is known as “synaptotoxicity.” In this mechanism of neural-circuit disruption, the “synapses,” or junctions between neurons, become weakened or shrink away due to some factor that injures the neurons locally along their axons (the long processes of neurons that transmit signals) and dendrites (the threadlike extensions of neurons that receive nerve signals) without inducing the neurons themselves to die.

In the experiments at UC San Diego headed by Jimcy Platholi, a postdoctoral researcher in Halpain’s lab who is now at Weill Cornell, the scientists used neurons from embryonic rats taken from the hippocampus, a part of the mammalian forebrain essential for encoding newly acquired memories and ensuring that short-term memories are converted into long-term memories. The researchers cultured these brain cells in a laboratory dish for three weeks, allowing the neurons time to mature and to develop a dense network of synaptic connections and “dendritic spines”—specialized structures that protrude from the dendrites and are essential mediators of activity throughout neural networks.

“Evidence from animal studies indicates that new dendritic spines emerge and existing spines expand in size during learning and memory,” explained Halpain. “Therefore, the overall numbers and size of dendritic spines can profoundly impact the strength of neural networks. Since neural network activity underlies all brain function, changes in dendritic spine number and shape can influence cognition and behavior.”

Using neurons in culture, rather than intact animal brains, allowed the biologists to take images of the synapses at high spatial resolution using techniques called fluorescence light microscopy and confocal imaging. They also used time-lapse microscopy to observe structural changes in individual dendritic spines during exposure to isoflurane. Karl Herold, a research associate in the Hemmings laboratory and a co-author of the study, performed some of the image analysis.

“Imaging of human brain synapses at this level of detail is impossible with today’s technology and it remains very challenging even in laboratory rodents,” said Halpain. “It was important that we performed our study using rodent neurons in a culture dish, so that we could really drill down into the subcellular and molecular details of how anesthetics work.”

The researchers wondered whether brief exposure to isoflurane would alter the numbers and size of dendritic spines, so they applied the anesthetic to the cultured rat cells at concentrations and durations (up to 60 minutes) that are frequently used during surgery.

“We observed detectable decreases in dendritic spine numbers and shape within as little as 10 minutes,” said Halpain. “However this spine loss and shrinkage was reversible after the anesthetic was washed out of the culture.”

“Our study was reassuring in the sense that the effects are not irreversible and this fits in with known clinical effects,” said Hemmings. “For the most part, we find that the effects are reversible.”

“We clearly see an effect—a very marked effect on the dendritic spines—from use of this drug that was reversible, suggesting that it is not a toxic effect, but something more relevant to the pharmacological actions of the drug,” he added. “Connecting what we found to the cognitive effects of isoflurane will require much more detailed analysis.”

The team plans to follow up its study with future experiments to probe the molecular mechanisms and long-lasting consequences of isoflurane’s effects on neuron synapses and examine other commonly-used anesthetics for surgery.

neurosciencestuff:

Study Suggests Disruptive Effects of Anesthesia on Brain Cell Connections Are Temporary
A study of juvenile rat brain cells suggests that the effects of a commonly used anesthetic drug on the connections between brain cells are temporary.
The study, published in this week’s issue of the journal PLOS ONE, was conducted by biologists at the University of California, San Diego and Weill Cornell Medical College in New York in response to concerns, arising from multiple studies on humans over the past decade, that exposing children to general anesthetics may increase their susceptibility to long-term cognitive and behavioral deficits, such as learning disabilities.
An estimated six million children, including 1.5 million infants, undergo surgery in the United States requiring general anesthesia each year and a least two large-scale clinical studies are now underway to determine the potential risks to children and adults.
“Since these procedures are unavoidable in most cases, it’s important to understand the mechanisms associated with the potentially toxic effects of anesthetics on the developing brain, and on the adult brain as well,” said Shelley Halpain, a professor of biology at UC San Diego and the Sanford Consortium for Regenerative Medicine, who co-headed the investigation. “Because the clinical studies haven’t been completed, preclinical studies, such as ours, are needed to define the effects of various anesthetics on brain structure and function.”
“There is concern now about cognitive dysfunction from surgery and anesthesia—how much these effects are either permanent or slowly reversible is very controversial,” said Hugh Hemmings, Jr., chair of anesthesiology at Weill Cornell and the study’s other senior author. “It has been suggested recently that some of the effects of anesthesia may be more lasting than previously thought. It is not clear whether the residual effects after an operation are due to the surgery itself, or the hospitalization and attendant trauma, medications and stress—or a combination of these issues.”
However, he added, “There is evidence that some of the delayed or persistent cognitive effects after surgery are not primarily due to anesthesia itself, but more importantly to brain inflammation resulting from the surgery. But this is not yet clear.”
The team of biologists examined one of the most commonly used general anesthetics, a derivative of ether called “isoflurane” used to maintain anesthesia during surgery.
“Previous studies in cultured neurons and in the intact brains of rodents provided evidence suggesting that exposure to anesthetics might render neurons more susceptible to cell death through a process called ‘apoptosis’,” said Halpain. “While overt cell death could certainly be one way to explain any long-lasting neurocognitive consequences of general anesthesia, we hypothesized that there could be other cellular mechanisms that disrupt neural circuits without inducing cell death per se.”
One such mechanism, she added, is known as “synaptotoxicity.” In this mechanism of neural-circuit disruption, the “synapses,” or junctions between neurons, become weakened or shrink away due to some factor that injures the neurons locally along their axons (the long processes of neurons that transmit signals) and dendrites (the threadlike extensions of neurons that receive nerve signals) without inducing the neurons themselves to die.
In the experiments at UC San Diego headed by Jimcy Platholi, a postdoctoral researcher in Halpain’s lab who is now at Weill Cornell, the scientists used neurons from embryonic rats taken from the hippocampus, a part of the mammalian forebrain essential for encoding newly acquired memories and ensuring that short-term memories are converted into long-term memories. The researchers cultured these brain cells in a laboratory dish for three weeks, allowing the neurons time to mature and to develop a dense network of synaptic connections and “dendritic spines”—specialized structures that protrude from the dendrites and are essential mediators of activity throughout neural networks.
“Evidence from animal studies indicates that new dendritic spines emerge and existing spines expand in size during learning and memory,” explained Halpain. “Therefore, the overall numbers and size of dendritic spines can profoundly impact the strength of neural networks. Since neural network activity underlies all brain function, changes in dendritic spine number and shape can influence cognition and behavior.”
Using neurons in culture, rather than intact animal brains, allowed the biologists to take images of the synapses at high spatial resolution using techniques called fluorescence light microscopy and confocal imaging. They also used time-lapse microscopy to observe structural changes in individual dendritic spines during exposure to isoflurane. Karl Herold, a research associate in the Hemmings laboratory and a co-author of the study, performed some of the image analysis.
“Imaging of human brain synapses at this level of detail is impossible with today’s technology and it remains very challenging even in laboratory rodents,” said Halpain. “It was important that we performed our study using rodent neurons in a culture dish, so that we could really drill down into the subcellular and molecular details of how anesthetics work.”
The researchers wondered whether brief exposure to isoflurane would alter the numbers and size of dendritic spines, so they applied the anesthetic to the cultured rat cells at concentrations and durations (up to 60 minutes) that are frequently used during surgery.
“We observed detectable decreases in dendritic spine numbers and shape within as little as 10 minutes,” said Halpain. “However this spine loss and shrinkage was reversible after the anesthetic was washed out of the culture.”
“Our study was reassuring in the sense that the effects are not irreversible and this fits in with known clinical effects,” said Hemmings. “For the most part, we find that the effects are reversible.”
“We clearly see an effect—a very marked effect on the dendritic spines—from use of this drug that was reversible, suggesting that it is not a toxic effect, but something more relevant to the pharmacological actions of the drug,” he added. “Connecting what we found to the cognitive effects of isoflurane will require much more detailed analysis.”
The team plans to follow up its study with future experiments to probe the molecular mechanisms and long-lasting consequences of isoflurane’s effects on neuron synapses and examine other commonly-used anesthetics for surgery.
❝ MONEY CAN’T BUY HAPPINESS BUT IT CAN BUY BACON, AND THAT’S BASICALLY THE SAME THING.

— Andy Biersack (via zanibonisaurus)

(Source: throughtherabbithole29)

Coolest guys ever.

#personal#minions
Coolest guys ever.

madsaboutmikkelsen:

Rejseholdet | Allan Fischer | Assistancemelding A-21/99 del 1

(Source: absintheandroses)

This week’s capillary graveyard. And it’s only Tuesday.. whaaaat?

#personal#lab life
This week’s capillary graveyard. And it’s only Tuesday.. whaaaat?

luminescentlabs:

Fluorescent seahorse.

Biofluorescence of the seahorse, Hippocampus erectus. 

Photo: Drs. David Gruber, Vincent Pieribone, John Sparks.  Animation: Emma Welles.

luminescentlabs:

Fluorescent seahorse.
Biofluorescence of the seahorse, Hippocampus erectus. 
Photo: Drs. David Gruber, Vincent Pieribone, John Sparks.  Animation: Emma Welles.

maniacalmedical:

Human Fetal Skull

(Source: )

bpod-mrc:

26 July 2014

Lighting Up AID

The protein AID (here stained green) is crucial for fighting off unwanted germs. Without it, our immune system wouldn’t be able to make specific antibodies against individual invaders. Until recently, science was reaching in the dark to grasp how exactly AID comes to aid in the fight against disease: no one had been able to image the protein inside cells. Now, researchers have successfully lit up AID using a technique called immunofluorescence, creating a picture of AID molecules placed both in and outside the cells’ nuclei (red). This special microscopy method is by no means new, but getting it to work here was a real challenge. Interestingly, when the protein is active in the wrong places, it can contribute to a range of diseases including cancer. So being able to image AID has potential far beyond furthering our understanding of the immune system.

Written by Emma Bornebroek

Image courtesy of David Rueda, Sheila Quingchun Xie and colleagues
MRC Clinical Sciences Centre
Copyright held by original authors
Research by Single Molecule Imaging Group, MRC Clinical Sciences Centre

You can also follow BPoD on Twitter and Facebook

bpod-mrc:

26 July 2014
Lighting Up AID
The protein AID (here stained green) is crucial for fighting off unwanted germs. Without it, our immune system wouldn’t be able to make specific antibodies against individual invaders. Until recently, science was reaching in the dark to grasp how exactly AID comes to aid in the fight against disease: no one had been able to image the protein inside cells. Now, researchers have successfully lit up AID using a technique called immunofluorescence, creating a picture of AID molecules placed both in and outside the cells’ nuclei (red). This special microscopy method is by no means new, but getting it to work here was a real challenge. Interestingly, when the protein is active in the wrong places, it can contribute to a range of diseases including cancer. So being able to image AID has potential far beyond furthering our understanding of the immune system.
Written by Emma Bornebroek
—
Image courtesy of David Rueda, Sheila Quingchun Xie and colleaguesMRC Clinical Sciences Centre Copyright held by original authorsResearch by Single Molecule Imaging Group, MRC Clinical Sciences Centre
—
You can also follow BPoD on Twitter and Facebook

s-c-i-guy:

Juvenile Acorn worm (Saccoglossus kowalevskii)

Light Sheet Fluorescence Microscopy (LSFM) of a juvenile Acorn worm (Saccoglossus kowalevskii), stained with AF488 phalloidin and DAPI.

Sample provided by Jessica Gray, Harvard Center for Biological Imaging. Acquired with ZEISS Lightsheet Z.1

source

s-c-i-guy:

Juvenile Acorn worm (Saccoglossus kowalevskii)
Light Sheet Fluorescence Microscopy (LSFM) of a juvenile Acorn worm (Saccoglossus kowalevskii), stained with AF488 phalloidin and DAPI. 
Sample provided by Jessica Gray, Harvard Center for Biological Imaging. Acquired with ZEISS Lightsheet Z.1
source

adventuresinchemistry:

Nothing makes you look more suspicious than randomly laughing while doing science, because you know who else randomly laughs while doing science? Supervillians.

weightliftingcanadian:

Zoe Smith (-58kg, England) lifted 92kg in the snatch and 118kg (commonwealth games record) in the clean & jerk  on her way to the gold medal! She celebrated her gold with a backflip!